Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC28.13■■■□□ 2.09
Abca8bQ8K440 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Abca8bQ8K440 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca8bQ8K440 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Abca8bQ8K440 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Abca8bQ8K440 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca8bQ8K440 Gm7367-201ENSMUST00000057611 492 ntBASIC28.11■■■□□ 2.09
Abca8bQ8K440 Mtag2-201ENSMUST00000058665 714 ntBASIC28.11■■■□□ 2.09
Abca8bQ8K440 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8bQ8K440 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8bQ8K440 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Abca8bQ8K440 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC28.11■■■□□ 2.09
Abca8bQ8K440 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC28.11■■■□□ 2.09
Abca8bQ8K440 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Gm5540-201ENSMUST00000131852 1848 ntBASIC28.1■■■□□ 2.09
Abca8bQ8K440 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Abca8bQ8K440 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8bQ8K440 Gm45560-201ENSMUST00000211492 1472 ntBASIC28.09■■■□□ 2.09
Abca8bQ8K440 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8bQ8K440 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8bQ8K440 Timm23-208ENSMUST00000226683 750 ntBASIC28.09■■■□□ 2.09
Abca8bQ8K440 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8bQ8K440 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC28.09■■■□□ 2.09
Abca8bQ8K440 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Abca8bQ8K440 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Abca8bQ8K440 Gm17641-201ENSMUST00000166328 2350 ntBASIC28.08■■■□□ 2.09
Abca8bQ8K440 Gm15375-201ENSMUST00000119510 849 ntBASIC28.08■■■□□ 2.09
Abca8bQ8K440 Otx2os1-204ENSMUST00000227221 751 ntBASIC28.08■■■□□ 2.09
Abca8bQ8K440 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca8bQ8K440 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Abca8bQ8K440 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca8bQ8K440 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Abca8bQ8K440 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Gm27741-201ENSMUST00000185060 237 ntBASIC28.07■■■□□ 2.08
Abca8bQ8K440 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Abca8bQ8K440 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8bQ8K440 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8bQ8K440 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Abca8bQ8K440 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8bQ8K440 Gm37292-201ENSMUST00000192062 758 ntBASIC28.06■■■□□ 2.08
Abca8bQ8K440 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Abca8bQ8K440 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8bQ8K440 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8bQ8K440 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8bQ8K440 Gm10138-203ENSMUST00000206952 366 ntBASIC28.05■■■□□ 2.08
Abca8bQ8K440 AC107452.1-201ENSMUST00000227963 481 ntBASIC28.05■■■□□ 2.08
Abca8bQ8K440 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Abca8bQ8K440 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Abca8bQ8K440 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC28.04■■■□□ 2.08
Abca8bQ8K440 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Abca8bQ8K440 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8bQ8K440 Gm10517-202ENSMUST00000192970 758 ntBASIC28.03■■■□□ 2.08
Abca8bQ8K440 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8bQ8K440 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8bQ8K440 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC28.03■■■□□ 2.08
Abca8bQ8K440 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8bQ8K440 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8bQ8K440 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC28.03■■■□□ 2.08
Abca8bQ8K440 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC28.03■■■□□ 2.08
Abca8bQ8K440 AC156016.1-201ENSMUST00000227190 1035 ntBASIC28.03■■■□□ 2.08
Abca8bQ8K440 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Abca8bQ8K440 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Abca8bQ8K440 Gm6728-201ENSMUST00000178117 1065 ntBASIC28.01■■■□□ 2.07
Abca8bQ8K440 Gm8309-201ENSMUST00000206627 1448 ntBASIC28.01■■■□□ 2.07
Abca8bQ8K440 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
Abca8bQ8K440 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Abca8bQ8K440 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Abca8bQ8K440 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Abca8bQ8K440 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Abca8bQ8K440 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
Abca8bQ8K440 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Abca8bQ8K440 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC28■■■□□ 2.07
Abca8bQ8K440 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC28■■■□□ 2.07
Abca8bQ8K440 Gm42545-201ENSMUST00000202755 922 ntBASIC28■■■□□ 2.07
Abca8bQ8K440 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC28■■■□□ 2.07
Abca8bQ8K440 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC28■■■□□ 2.07
Abca8bQ8K440 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Abca8bQ8K440 Gm12382-201ENSMUST00000122005 922 ntBASIC28■■■□□ 2.07
Abca8bQ8K440 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms