Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.58■□□□□ 0.57
Mrpl47Q8K2Y7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mrpl47Q8K2Y7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mrpl47Q8K2Y7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Mrpl47Q8K2Y7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl47Q8K2Y7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl47Q8K2Y7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl47Q8K2Y7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl47Q8K2Y7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Mrpl47Q8K2Y7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl47Q8K2Y7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl47Q8K2Y7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
Mrpl47Q8K2Y7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl47Q8K2Y7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Gm12251-201ENSMUST00000117893 792 ntBASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
Mrpl47Q8K2Y7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Mrpl47Q8K2Y7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl47Q8K2Y7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms