Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Gm15820-201ENSMUST00000201566 728 ntBASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cnot3Q8K0V4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cnot3Q8K0V4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cnot3Q8K0V4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Cnot3Q8K0V4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Serp2-204ENSMUST00000228055 705 ntBASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnot3Q8K0V4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnot3Q8K0V4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cnot3Q8K0V4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnot3Q8K0V4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms