Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim5Q8CI51 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim5Q8CI51 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim5Q8CI51 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim5Q8CI51 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Gm43017-201ENSMUST00000198296 752 ntBASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim5Q8CI51 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim5Q8CI51 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pdlim5Q8CI51 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pdlim5Q8CI51 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Gm40848-201ENSMUST00000221998 324 ntBASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms