Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Rdh1Q8CGV4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.25■□□□□ 0.51
Rdh1Q8CGV4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rdh1Q8CGV4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rdh1Q8CGV4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rdh1Q8CGV4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rdh1Q8CGV4 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rdh1Q8CGV4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms