Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.77■□□□□ 0.76
Brat1Q8C3R1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brat1Q8C3R1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brat1Q8C3R1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brat1Q8C3R1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.76■□□□□ 0.75
Brat1Q8C3R1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Gm29257-201ENSMUST00000186115 639 ntBASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brat1Q8C3R1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Brat1Q8C3R1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Gm6211-202ENSMUST00000167849 925 ntBASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brat1Q8C3R1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Gm13148-201ENSMUST00000118892 745 ntBASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.72■□□□□ 0.75
Brat1Q8C3R1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Brat1Q8C3R1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Brat1Q8C3R1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brat1Q8C3R1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brat1Q8C3R1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms