Protein–RNA interactions for Protein: Q8BY02

Nkrf, NF-kappa-B-repressing factor, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NkrfQ8BY02 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NkrfQ8BY02 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NkrfQ8BY02 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NkrfQ8BY02 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NkrfQ8BY02 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NkrfQ8BY02 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.04■□□□□ 0.96
NkrfQ8BY02 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NkrfQ8BY02 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
NkrfQ8BY02 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NkrfQ8BY02 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
NkrfQ8BY02 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.03■□□□□ 0.96
NkrfQ8BY02 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NkrfQ8BY02 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NkrfQ8BY02 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NkrfQ8BY02 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.03■□□□□ 0.96
NkrfQ8BY02 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NkrfQ8BY02 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NkrfQ8BY02 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NkrfQ8BY02 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21■□□□□ 0.95
NkrfQ8BY02 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NkrfQ8BY02 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21■□□□□ 0.95
NkrfQ8BY02 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
NkrfQ8BY02 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NkrfQ8BY02 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.99■□□□□ 0.95
NkrfQ8BY02 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NkrfQ8BY02 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NkrfQ8BY02 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NkrfQ8BY02 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.97■□□□□ 0.95
NkrfQ8BY02 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NkrfQ8BY02 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NkrfQ8BY02 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NkrfQ8BY02 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.95■□□□□ 0.95
NkrfQ8BY02 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
NkrfQ8BY02 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
NkrfQ8BY02 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NkrfQ8BY02 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NkrfQ8BY02 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
NkrfQ8BY02 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NkrfQ8BY02 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NkrfQ8BY02 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.95■□□□□ 0.94
NkrfQ8BY02 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms