Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Suds3Q8BR65 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Suds3Q8BR65 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Suds3Q8BR65 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Suds3Q8BR65 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Suds3Q8BR65 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Golph3-205ENSMUST00000228671 2842 ntBASIC19.14■□□□□ 0.65
Suds3Q8BR65 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Suds3Q8BR65 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Suds3Q8BR65 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Suds3Q8BR65 Gm42569-201ENSMUST00000200539 472 ntBASIC19.13■□□□□ 0.65
Suds3Q8BR65 Gm42642-201ENSMUST00000200683 355 ntBASIC19.13■□□□□ 0.65
Suds3Q8BR65 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.13■□□□□ 0.65
Suds3Q8BR65 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Suds3Q8BR65 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Suds3Q8BR65 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Suds3Q8BR65 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Suds3Q8BR65 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.12■□□□□ 0.65
Suds3Q8BR65 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Gm42778-201ENSMUST00000199644 553 ntBASIC19.12■□□□□ 0.65
Suds3Q8BR65 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Suds3Q8BR65 Rarb-207ENSMUST00000225921 2756 ntBASIC19.11■□□□□ 0.65
Suds3Q8BR65 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Suds3Q8BR65 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Suds3Q8BR65 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Gm26571-201ENSMUST00000181399 666 ntBASIC19.1■□□□□ 0.65
Suds3Q8BR65 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Suds3Q8BR65 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.09■□□□□ 0.65
Suds3Q8BR65 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Suds3Q8BR65 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.09■□□□□ 0.65
Suds3Q8BR65 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms