Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sfr1Q8BP27 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sfr1Q8BP27 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sfr1Q8BP27 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sfr1Q8BP27 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sfr1Q8BP27 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sfr1Q8BP27 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sfr1Q8BP27 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms