Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Gm8495-201ENSMUST00000188740 694 ntBASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4bQ8BGE6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atg4bQ8BGE6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atg4bQ8BGE6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Atg4bQ8BGE6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4bQ8BGE6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Gm26571-201ENSMUST00000181399 666 ntBASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atg4bQ8BGE6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 AV356131-201ENSMUST00000206201 750 ntBASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
Atg4bQ8BGE6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.61■□□□□ 0.41
Atg4bQ8BGE6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms