Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upk3bQ80YF6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Upk3bQ80YF6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upk3bQ80YF6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upk3bQ80YF6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Upk3bQ80YF6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Upk3bQ80YF6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk3bQ80YF6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Upk3bQ80YF6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Upk3bQ80YF6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.83■□□□□ 0.13
Upk3bQ80YF6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Upk3bQ80YF6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Grk6-206ENSMUST00000224995 2971 ntBASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk3bQ80YF6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Upk3bQ80YF6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk3bQ80YF6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Gm12922-201ENSMUST00000120626 809 ntBASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms