Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.41■□□□□ 0.7
Trim62Q80V85 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Trim62Q80V85 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim62Q80V85 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.41■□□□□ 0.7
Trim62Q80V85 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim62Q80V85 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim62Q80V85 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim62Q80V85 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim62Q80V85 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Trim62Q80V85 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Trim62Q80V85 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim62Q80V85 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim62Q80V85 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim62Q80V85 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim62Q80V85 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim62Q80V85 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.39■□□□□ 0.69
Trim62Q80V85 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim62Q80V85 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.39■□□□□ 0.69
Trim62Q80V85 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim62Q80V85 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim62Q80V85 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim62Q80V85 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim62Q80V85 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim62Q80V85 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim62Q80V85 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Trim62Q80V85 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim62Q80V85 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Trim62Q80V85 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.37■□□□□ 0.69
Trim62Q80V85 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim62Q80V85 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim62Q80V85 Gm6365-201ENSMUST00000054711 744 ntBASIC19.37■□□□□ 0.69
Trim62Q80V85 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim62Q80V85 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Mir5133-201ENSMUST00000174955 77 ntBASIC19.36■□□□□ 0.69
Trim62Q80V85 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim62Q80V85 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim62Q80V85 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim62Q80V85 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trim62Q80V85 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim62Q80V85 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.35■□□□□ 0.69
Trim62Q80V85 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim62Q80V85 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim62Q80V85 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim62Q80V85 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim62Q80V85 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim62Q80V85 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Trim62Q80V85 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms