Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Gm12896-201ENSMUST00000118430 226 ntBASIC17.24■□□□□ 0.35
Pif1Q80SX8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.24■□□□□ 0.35
Pif1Q80SX8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.24■□□□□ 0.35
Pif1Q80SX8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pif1Q80SX8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pif1Q80SX8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.22■□□□□ 0.35
Pif1Q80SX8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.22■□□□□ 0.35
Pif1Q80SX8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pif1Q80SX8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pif1Q80SX8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pif1Q80SX8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pif1Q80SX8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pif1Q80SX8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pif1Q80SX8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.2■□□□□ 0.34
Pif1Q80SX8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pif1Q80SX8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pif1Q80SX8 Mir6982-201ENSMUST00000184354 68 ntBASIC17.2■□□□□ 0.34
Pif1Q80SX8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.2■□□□□ 0.34
Pif1Q80SX8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pif1Q80SX8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pif1Q80SX8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pif1Q80SX8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms