Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssx9Q6XAS3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssx9Q6XAS3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ssx9Q6XAS3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Gm43060-201ENSMUST00000200621 289 ntBASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssx9Q6XAS3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssx9Q6XAS3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssx9Q6XAS3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ssx9Q6XAS3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ssx9Q6XAS3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ssx9Q6XAS3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ssx9Q6XAS3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.6■□□□□ 0.57
Ssx9Q6XAS3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ssx9Q6XAS3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.6■□□□□ 0.57
Ssx9Q6XAS3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms