Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Gm18025-201ENSMUST00000221733 862 ntBASIC21.56■■□□□ 1.04
Scn10aQ6QIY3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn10aQ6QIY3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn10aQ6QIY3 Gm3375-201ENSMUST00000203929 796 ntBASIC21.55■■□□□ 1.04
Scn10aQ6QIY3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn10aQ6QIY3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn10aQ6QIY3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn10aQ6QIY3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn10aQ6QIY3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn10aQ6QIY3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.53■■□□□ 1.04
Scn10aQ6QIY3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn10aQ6QIY3 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.53■■□□□ 1.04
Scn10aQ6QIY3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn10aQ6QIY3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn10aQ6QIY3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Gm7889-201ENSMUST00000185591 958 ntBASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Mtag2-201ENSMUST00000058665 714 ntBASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Gm10819-201ENSMUST00000099988 561 ntBASIC21.52■■□□□ 1.04
Scn10aQ6QIY3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.52■■□□□ 1.03
Scn10aQ6QIY3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Scn10aQ6QIY3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn10aQ6QIY3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.51■■□□□ 1.03
Scn10aQ6QIY3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn10aQ6QIY3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.51■■□□□ 1.03
Scn10aQ6QIY3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn10aQ6QIY3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Gm11539-201ENSMUST00000119837 557 ntBASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Gm13436-201ENSMUST00000120418 567 ntBASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Gm13559-201ENSMUST00000120476 863 ntBASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Gm30025-201ENSMUST00000218555 728 ntBASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn10aQ6QIY3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Gm43183-201ENSMUST00000200632 547 ntBASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.48■■□□□ 1.03
Scn10aQ6QIY3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Odf3b-204ENSMUST00000227834 930 ntBASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms