Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.76■■□□□ 1.39
Clcn1Q64347 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Clcn1Q64347 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clcn1Q64347 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clcn1Q64347 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clcn1Q64347 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Clcn1Q64347 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clcn1Q64347 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC23.75■■□□□ 1.39
Clcn1Q64347 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clcn1Q64347 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Clcn1Q64347 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Clcn1Q64347 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.74■■□□□ 1.39
Clcn1Q64347 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.74■■□□□ 1.39
Clcn1Q64347 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.74■■□□□ 1.39
Clcn1Q64347 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Clcn1Q64347 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Clcn1Q64347 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Clcn1Q64347 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Clcn1Q64347 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Clcn1Q64347 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Clcn1Q64347 Gm10698-201ENSMUST00000182663 604 ntBASIC23.73■■□□□ 1.39
Clcn1Q64347 Gm7977-201ENSMUST00000193787 748 ntBASIC23.73■■□□□ 1.39
Clcn1Q64347 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Clcn1Q64347 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clcn1Q64347 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Clcn1Q64347 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Clcn1Q64347 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.71■■□□□ 1.39
Clcn1Q64347 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Clcn1Q64347 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Clcn1Q64347 Gm44549-201ENSMUST00000208351 577 ntBASIC23.71■■□□□ 1.39
Clcn1Q64347 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.71■■□□□ 1.39
Clcn1Q64347 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Clcn1Q64347 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Clcn1Q64347 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Clcn1Q64347 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Clcn1Q64347 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Clcn1Q64347 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Clcn1Q64347 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Clcn1Q64347 Gm2399-201ENSMUST00000104944 225 ntBASIC23.7■■□□□ 1.38
Clcn1Q64347 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.7■■□□□ 1.38
Clcn1Q64347 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Clcn1Q64347 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.69■■□□□ 1.38
Clcn1Q64347 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Clcn1Q64347 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.69■■□□□ 1.38
Clcn1Q64347 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Clcn1Q64347 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn1Q64347 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn1Q64347 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn1Q64347 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn1Q64347 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn1Q64347 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.68■■□□□ 1.38
Clcn1Q64347 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.68■■□□□ 1.38
Clcn1Q64347 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Clcn1Q64347 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.67■■□□□ 1.38
Clcn1Q64347 Gm715-201ENSMUST00000117865 831 ntBASIC23.67■■□□□ 1.38
Clcn1Q64347 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Gm6576-201ENSMUST00000169678 883 ntBASIC23.67■■□□□ 1.38
Clcn1Q64347 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.67■■□□□ 1.38
Clcn1Q64347 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Clcn1Q64347 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn1Q64347 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Clcn1Q64347 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Clcn1Q64347 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Clcn1Q64347 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.66■■□□□ 1.38
Clcn1Q64347 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Clcn1Q64347 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.66■■□□□ 1.38
Clcn1Q64347 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms