Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zfp248Q640N4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zfp248Q640N4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Gm27454-201ENSMUST00000185090 204 ntBASIC14.25□□□□□ -0.13
Zfp248Q640N4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zfp248Q640N4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.24□□□□□ -0.13
Zfp248Q640N4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Zfp248Q640N4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.23□□□□□ -0.13
Zfp248Q640N4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.23□□□□□ -0.13
Zfp248Q640N4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zfp248Q640N4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.22□□□□□ -0.13
Zfp248Q640N4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Zfp248Q640N4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Zfp248Q640N4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Zfp248Q640N4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Gm7860-201ENSMUST00000121190 879 ntBASIC14.21□□□□□ -0.13
Zfp248Q640N4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Zfp248Q640N4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.21□□□□□ -0.14
Zfp248Q640N4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Zfp248Q640N4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Zfp248Q640N4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Zfp248Q640N4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms