Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.98■□□□□ 0.63
Six4Q61321 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.98■□□□□ 0.63
Six4Q61321 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.97■□□□□ 0.63
Six4Q61321 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Six4Q61321 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.97■□□□□ 0.63
Six4Q61321 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.97■□□□□ 0.63
Six4Q61321 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Six4Q61321 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Six4Q61321 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Six4Q61321 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six4Q61321 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.96■□□□□ 0.63
Six4Q61321 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.96■□□□□ 0.63
Six4Q61321 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.96■□□□□ 0.63
Six4Q61321 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.96■□□□□ 0.63
Six4Q61321 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Six4Q61321 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Six4Q61321 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.96■□□□□ 0.63
Six4Q61321 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.95■□□□□ 0.62
Six4Q61321 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Six4Q61321 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Six4Q61321 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.95■□□□□ 0.62
Six4Q61321 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Six4Q61321 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.95■□□□□ 0.62
Six4Q61321 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Six4Q61321 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Six4Q61321 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six4Q61321 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.94■□□□□ 0.62
Six4Q61321 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Six4Q61321 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Six4Q61321 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six4Q61321 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.93■□□□□ 0.62
Six4Q61321 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.93■□□□□ 0.62
Six4Q61321 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.93■□□□□ 0.62
Six4Q61321 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Six4Q61321 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.93■□□□□ 0.62
Six4Q61321 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.93■□□□□ 0.62
Six4Q61321 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six4Q61321 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six4Q61321 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six4Q61321 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six4Q61321 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six4Q61321 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.92■□□□□ 0.62
Six4Q61321 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.92■□□□□ 0.62
Six4Q61321 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.92■□□□□ 0.62
Six4Q61321 Gm37179-201ENSMUST00000194862 823 ntBASIC18.92■□□□□ 0.62
Six4Q61321 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms