Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.84■□□□□ 0.45
Nr1h4Q60641 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h4Q60641 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Nr1h4Q60641 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h4Q60641 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h4Q60641 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h4Q60641 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.81■□□□□ 0.44
Nr1h4Q60641 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h4Q60641 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h4Q60641 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.8■□□□□ 0.44
Nr1h4Q60641 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h4Q60641 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.79■□□□□ 0.44
Nr1h4Q60641 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h4Q60641 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Nr1h4Q60641 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h4Q60641 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h4Q60641 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nr1h4Q60641 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms