Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.33■□□□□ 0.2
Vmn1r223Q5SSA0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vmn1r223Q5SSA0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Spcs1-204ENSMUST00000226782 949 ntBASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Gm6139-201ENSMUST00000079261 882 ntBASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vmn1r223Q5SSA0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Gm8493-201ENSMUST00000196881 489 ntBASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vmn1r223Q5SSA0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vmn1r223Q5SSA0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vmn1r223Q5SSA0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vmn1r223Q5SSA0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.27■□□□□ 0.2
Vmn1r223Q5SSA0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vmn1r223Q5SSA0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Vmn1r223Q5SSA0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Vmn1r223Q5SSA0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms