Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rc3h1Q4VGL6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rc3h1Q4VGL6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rc3h1Q4VGL6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Rc3h1Q4VGL6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rc3h1Q4VGL6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Gm37856-201ENSMUST00000191634 999 ntBASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.7■■□□□ 1.06
Rc3h1Q4VGL6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rc3h1Q4VGL6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rc3h1Q4VGL6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rc3h1Q4VGL6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.68■■□□□ 1.06
Rc3h1Q4VGL6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rc3h1Q4VGL6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rc3h1Q4VGL6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Rc3h1Q4VGL6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rc3h1Q4VGL6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms