Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdkl5Q3UTQ8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 Gm42778-201ENSMUST00000199644 553 ntBASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl5Q3UTQ8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl5Q3UTQ8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.71■■□□□ 1.07
Cdkl5Q3UTQ8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdkl5Q3UTQ8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl5Q3UTQ8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdkl5Q3UTQ8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl5Q3UTQ8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms