Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snx27Q3UHD6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.35■□□□□ 0.85
Snx27Q3UHD6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Snx27Q3UHD6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.35■□□□□ 0.85
Snx27Q3UHD6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snx27Q3UHD6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snx27Q3UHD6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Snx27Q3UHD6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snx27Q3UHD6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snx27Q3UHD6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Snx27Q3UHD6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Snx27Q3UHD6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snx27Q3UHD6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.32■□□□□ 0.84
Snx27Q3UHD6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
Snx27Q3UHD6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snx27Q3UHD6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx27Q3UHD6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Snx27Q3UHD6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snx27Q3UHD6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Snx27Q3UHD6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snx27Q3UHD6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Gm27275-201ENSMUST00000184318 272 ntBASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Trmt13-210ENSMUST00000198454 880 ntBASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snx27Q3UHD6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snx27Q3UHD6 Gm12896-201ENSMUST00000118430 226 ntBASIC20.28■□□□□ 0.84
Snx27Q3UHD6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snx27Q3UHD6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snx27Q3UHD6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snx27Q3UHD6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snx27Q3UHD6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Gm8520-201ENSMUST00000186517 868 ntBASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.27■□□□□ 0.84
Snx27Q3UHD6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snx27Q3UHD6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snx27Q3UHD6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Snx27Q3UHD6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snx27Q3UHD6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Snx27Q3UHD6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snx27Q3UHD6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Snx27Q3UHD6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Snx27Q3UHD6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Snx27Q3UHD6 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.26■□□□□ 0.83
Snx27Q3UHD6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Snx27Q3UHD6 Gm44549-201ENSMUST00000208351 577 ntBASIC20.26■□□□□ 0.83
Snx27Q3UHD6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms