Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.94■□□□□ 0.14
Cln6Q3U466 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cln6Q3U466 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.94■□□□□ 0.14
Cln6Q3U466 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cln6Q3U466 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.93■□□□□ 0.14
Cln6Q3U466 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.93■□□□□ 0.14
Cln6Q3U466 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cln6Q3U466 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.93■□□□□ 0.14
Cln6Q3U466 Golgb1-201ENSMUST00000023534 498 ntBASIC15.93■□□□□ 0.14
Cln6Q3U466 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cln6Q3U466 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cln6Q3U466 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cln6Q3U466 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Cln6Q3U466 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.92■□□□□ 0.14
Cln6Q3U466 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.92■□□□□ 0.14
Cln6Q3U466 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.92■□□□□ 0.14
Cln6Q3U466 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cln6Q3U466 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cln6Q3U466 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cln6Q3U466 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cln6Q3U466 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cln6Q3U466 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cln6Q3U466 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cln6Q3U466 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Gm12922-201ENSMUST00000120626 809 ntBASIC15.9■□□□□ 0.14
Cln6Q3U466 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.9■□□□□ 0.14
Cln6Q3U466 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cln6Q3U466 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cln6Q3U466 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cln6Q3U466 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cln6Q3U466 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cln6Q3U466 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cln6Q3U466 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cln6Q3U466 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms