Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Gm26571-201ENSMUST00000181399 666 ntBASIC20.48■□□□□ 0.87
Trim43cP86449 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.48■□□□□ 0.87
Trim43cP86449 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trim43cP86449 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Gm5874-201ENSMUST00000096101 508 ntBASIC20.48■□□□□ 0.87
Trim43cP86449 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim43cP86449 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim43cP86449 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim43cP86449 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43cP86449 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43cP86449 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43cP86449 Gm42642-201ENSMUST00000200683 355 ntBASIC20.46■□□□□ 0.87
Trim43cP86449 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
Trim43cP86449 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43cP86449 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43cP86449 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.45■□□□□ 0.87
Trim43cP86449 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Trim43cP86449 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.45■□□□□ 0.86
Trim43cP86449 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim43cP86449 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim43cP86449 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43cP86449 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.45■□□□□ 0.86
Trim43cP86449 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim43cP86449 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43cP86449 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim43cP86449 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim43cP86449 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.43■□□□□ 0.86
Trim43cP86449 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim43cP86449 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43cP86449 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim43cP86449 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
Trim43cP86449 Gm8495-201ENSMUST00000188740 694 ntBASIC20.42■□□□□ 0.86
Trim43cP86449 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43cP86449 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.42■□□□□ 0.86
Trim43cP86449 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.41■□□□□ 0.86
Trim43cP86449 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim43cP86449 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.41■□□□□ 0.86
Trim43cP86449 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim43cP86449 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms