Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf1P81269 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf1P81269 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atf1P81269 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf1P81269 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Atf1P81269 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf1P81269 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Atf1P81269 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atf1P81269 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atf1P81269 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atf1P81269 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.2■□□□□ 0.18
Atf1P81269 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atf1P81269 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf1P81269 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Atf1P81269 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.19■□□□□ 0.18
Atf1P81269 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf1P81269 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.18■□□□□ 0.18
Atf1P81269 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.18■□□□□ 0.18
Atf1P81269 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.18■□□□□ 0.18
Atf1P81269 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.18■□□□□ 0.18
Atf1P81269 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Atf1P81269 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Atf1P81269 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf1P81269 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.17■□□□□ 0.18
Atf1P81269 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.17■□□□□ 0.18
Atf1P81269 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.17■□□□□ 0.18
Atf1P81269 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atf1P81269 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf1P81269 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Atf1P81269 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.16■□□□□ 0.18
Atf1P81269 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Atf1P81269 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.16■□□□□ 0.18
Atf1P81269 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Atf1P81269 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atf1P81269 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.16■□□□□ 0.18
Atf1P81269 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.16■□□□□ 0.18
Atf1P81269 Gm43060-201ENSMUST00000200621 289 ntBASIC16.16■□□□□ 0.18
Atf1P81269 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms