Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Shox2P70390 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shox2P70390 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.59■□□□□ 0.57
Shox2P70390 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shox2P70390 Gm9870-201ENSMUST00000063874 645 ntBASIC18.59■□□□□ 0.57
Shox2P70390 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shox2P70390 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.58■□□□□ 0.57
Shox2P70390 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shox2P70390 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Shox2P70390 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.58■□□□□ 0.56
Shox2P70390 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.58■□□□□ 0.56
Shox2P70390 Gm12366-201ENSMUST00000121722 873 ntBASIC18.58■□□□□ 0.56
Shox2P70390 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.58■□□□□ 0.56
Shox2P70390 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.58■□□□□ 0.56
Shox2P70390 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.58■□□□□ 0.56
Shox2P70390 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shox2P70390 Gm5786-201ENSMUST00000085368 882 ntBASIC18.58■□□□□ 0.56
Shox2P70390 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Shox2P70390 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shox2P70390 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shox2P70390 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shox2P70390 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.57■□□□□ 0.56
Shox2P70390 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.57■□□□□ 0.56
Shox2P70390 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.57■□□□□ 0.56
Shox2P70390 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.57■□□□□ 0.56
Shox2P70390 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Shox2P70390 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.57■□□□□ 0.56
Shox2P70390 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shox2P70390 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shox2P70390 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.56■□□□□ 0.56
Shox2P70390 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Shox2P70390 Serp2-204ENSMUST00000228055 705 ntBASIC18.56■□□□□ 0.56
Shox2P70390 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shox2P70390 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Shox2P70390 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shox2P70390 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shox2P70390 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.55■□□□□ 0.56
Shox2P70390 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.55■□□□□ 0.56
Shox2P70390 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Shox2P70390 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Gm8969-201ENSMUST00000199694 526 ntBASIC18.55■□□□□ 0.56
Shox2P70390 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Shox2P70390 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shox2P70390 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.54■□□□□ 0.56
Shox2P70390 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.54■□□□□ 0.56
Shox2P70390 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shox2P70390 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shox2P70390 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Shox2P70390 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shox2P70390 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.53■□□□□ 0.56
Shox2P70390 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Shox2P70390 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms