Protein–RNA interactions for Protein: P70217

Hoxd13, Homeobox protein Hox-D13, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd13P70217 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.45■□□□□ 0.7
Hoxd13P70217 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxd13P70217 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Gm6576-201ENSMUST00000169678 883 ntBASIC19.45■□□□□ 0.7
Hoxd13P70217 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxd13P70217 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.45■□□□□ 0.7
Hoxd13P70217 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.45■□□□□ 0.7
Hoxd13P70217 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd13P70217 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxd13P70217 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxd13P70217 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Gm18666-201ENSMUST00000190039 958 ntBASIC19.44■□□□□ 0.7
Hoxd13P70217 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.44■□□□□ 0.7
Hoxd13P70217 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.44■□□□□ 0.7
Hoxd13P70217 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.44■□□□□ 0.7
Hoxd13P70217 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.44■□□□□ 0.7
Hoxd13P70217 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd13P70217 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Hoxd13P70217 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxd13P70217 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd13P70217 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd13P70217 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd13P70217 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd13P70217 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hoxd13P70217 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd13P70217 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.43■□□□□ 0.7
Hoxd13P70217 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.43■□□□□ 0.7
Hoxd13P70217 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
Hoxd13P70217 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.42■□□□□ 0.7
Hoxd13P70217 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hoxd13P70217 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd13P70217 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd13P70217 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd13P70217 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd13P70217 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hoxd13P70217 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.42■□□□□ 0.7
Hoxd13P70217 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd13P70217 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd13P70217 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.41■□□□□ 0.7
Hoxd13P70217 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxd13P70217 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.41■□□□□ 0.7
Hoxd13P70217 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd13P70217 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Hoxd13P70217 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Gm10698-201ENSMUST00000182663 604 ntBASIC19.4■□□□□ 0.7
Hoxd13P70217 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.4■□□□□ 0.7
Hoxd13P70217 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxd13P70217 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd13P70217 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxd13P70217 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxd13P70217 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxd13P70217 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxd13P70217 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.39■□□□□ 0.69
Hoxd13P70217 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hoxd13P70217 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hoxd13P70217 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxd13P70217 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd13P70217 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd13P70217 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd13P70217 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd13P70217 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd13P70217 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd13P70217 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd13P70217 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hoxd13P70217 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hoxd13P70217 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Hoxd13P70217 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hoxd13P70217 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd13P70217 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd13P70217 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms