Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Gm12441-201ENSMUST00000121806 588 ntBASIC18.43■□□□□ 0.54
Lhx1P63006 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lhx1P63006 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.43■□□□□ 0.54
Lhx1P63006 Gm4968-201ENSMUST00000071458 858 ntBASIC18.43■□□□□ 0.54
Lhx1P63006 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx1P63006 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lhx1P63006 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lhx1P63006 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lhx1P63006 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx1P63006 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.41■□□□□ 0.54
Lhx1P63006 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Lhx1P63006 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.41■□□□□ 0.54
Lhx1P63006 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Lhx1P63006 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.41■□□□□ 0.54
Lhx1P63006 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx1P63006 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.4■□□□□ 0.54
Lhx1P63006 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.4■□□□□ 0.54
Lhx1P63006 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lhx1P63006 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lhx1P63006 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx1P63006 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.39■□□□□ 0.54
Lhx1P63006 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Lhx1P63006 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Lhx1P63006 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.39■□□□□ 0.53
Lhx1P63006 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lhx1P63006 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lhx1P63006 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx1P63006 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.38■□□□□ 0.53
Lhx1P63006 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.38■□□□□ 0.53
Lhx1P63006 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx1P63006 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.38■□□□□ 0.53
Lhx1P63006 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx1P63006 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx1P63006 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx1P63006 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx1P63006 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.38■□□□□ 0.53
Lhx1P63006 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx1P63006 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Lhx1P63006 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
Lhx1P63006 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lhx1P63006 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx1P63006 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx1P63006 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lhx1P63006 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.36■□□□□ 0.53
Lhx1P63006 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.36■□□□□ 0.53
Lhx1P63006 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx1P63006 Gm26524-201ENSMUST00000192339 390 ntBASIC18.36■□□□□ 0.53
Lhx1P63006 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.36■□□□□ 0.53
Lhx1P63006 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms