Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lsm3P62311 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.14■□□□□ 0.33
Lsm3P62311 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lsm3P62311 Gm7143-201ENSMUST00000222811 859 ntBASIC17.14■□□□□ 0.33
Lsm3P62311 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lsm3P62311 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lsm3P62311 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm3P62311 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.13■□□□□ 0.33
Lsm3P62311 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm3P62311 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lsm3P62311 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.12■□□□□ 0.33
Lsm3P62311 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lsm3P62311 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm3P62311 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lsm3P62311 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lsm3P62311 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lsm3P62311 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm3P62311 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lsm3P62311 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsm3P62311 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lsm3P62311 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm3P62311 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lsm3P62311 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lsm3P62311 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.09■□□□□ 0.33
Lsm3P62311 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm3P62311 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm3P62311 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm3P62311 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms