Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tpm1P58771 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.9■□□□□ 0.94
Tpm1P58771 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.9■□□□□ 0.94
Tpm1P58771 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Tpm1P58771 Gm22238-201ENSMUST00000175222 88 ntBASIC20.9■□□□□ 0.94
Tpm1P58771 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tpm1P58771 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.89■□□□□ 0.94
Tpm1P58771 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tpm1P58771 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.89■□□□□ 0.93
Tpm1P58771 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.89■□□□□ 0.93
Tpm1P58771 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tpm1P58771 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.88■□□□□ 0.93
Tpm1P58771 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.88■□□□□ 0.93
Tpm1P58771 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Tpm1P58771 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tpm1P58771 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tpm1P58771 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tpm1P58771 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tpm1P58771 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.87■□□□□ 0.93
Tpm1P58771 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tpm1P58771 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tpm1P58771 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Tpm1P58771 Gm15546-201ENSMUST00000122095 826 ntBASIC20.86■□□□□ 0.93
Tpm1P58771 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.86■□□□□ 0.93
Tpm1P58771 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tpm1P58771 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tpm1P58771 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tpm1P58771 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tpm1P58771 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.86■□□□□ 0.93
Tpm1P58771 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tpm1P58771 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.85■□□□□ 0.93
Tpm1P58771 Gm5812-201ENSMUST00000061073 957 ntBASIC20.85■□□□□ 0.93
Tpm1P58771 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm1P58771 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm1P58771 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tpm1P58771 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Tpm1P58771 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.84■□□□□ 0.93
Tpm1P58771 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.84■□□□□ 0.93
Tpm1P58771 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm1P58771 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm1P58771 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
Tpm1P58771 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm1P58771 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm1P58771 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm1P58771 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tpm1P58771 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm1P58771 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm1P58771 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm1P58771 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm1P58771 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm1P58771 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.83■□□□□ 0.93
Tpm1P58771 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm1P58771 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm1P58771 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms