Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.97■□□□□ 0.95
Hmgcs2P54869 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.97■□□□□ 0.95
Hmgcs2P54869 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hmgcs2P54869 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Gm7977-201ENSMUST00000193787 748 ntBASIC20.96■□□□□ 0.95
Hmgcs2P54869 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.96■□□□□ 0.95
Hmgcs2P54869 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Gm15378-201ENSMUST00000121894 207 ntBASIC20.95■□□□□ 0.94
Hmgcs2P54869 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs2P54869 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Gm13836-201ENSMUST00000121159 501 ntBASIC20.94■□□□□ 0.94
Hmgcs2P54869 Gm13158-201ENSMUST00000122007 736 ntBASIC20.94■□□□□ 0.94
Hmgcs2P54869 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.94■□□□□ 0.94
Hmgcs2P54869 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.94■□□□□ 0.94
Hmgcs2P54869 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs2P54869 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.93■□□□□ 0.94
Hmgcs2P54869 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.93■□□□□ 0.94
Hmgcs2P54869 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.93■□□□□ 0.94
Hmgcs2P54869 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hmgcs2P54869 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs2P54869 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.92■□□□□ 0.94
Hmgcs2P54869 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs2P54869 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hmgcs2P54869 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Hmgcs2P54869 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgcs2P54869 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms