Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nub1P54729 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Nub1P54729 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nub1P54729 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nub1P54729 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
Nub1P54729 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nub1P54729 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nub1P54729 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Nub1P54729 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Nub1P54729 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.11■□□□□ 0.81
Nub1P54729 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nub1P54729 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.1■□□□□ 0.81
Nub1P54729 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Nub1P54729 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.1■□□□□ 0.81
Nub1P54729 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nub1P54729 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nub1P54729 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nub1P54729 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Gm42569-201ENSMUST00000200539 472 ntBASIC20.09■□□□□ 0.81
Nub1P54729 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.09■□□□□ 0.81
Nub1P54729 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nub1P54729 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nub1P54729 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.09■□□□□ 0.81
Nub1P54729 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nub1P54729 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nub1P54729 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nub1P54729 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nub1P54729 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.08■□□□□ 0.81
Nub1P54729 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.08■□□□□ 0.81
Nub1P54729 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.08■□□□□ 0.81
Nub1P54729 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.08■□□□□ 0.81
Nub1P54729 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.08■□□□□ 0.81
Nub1P54729 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nub1P54729 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Nub1P54729 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nub1P54729 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nub1P54729 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nub1P54729 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Nub1P54729 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nub1P54729 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nub1P54729 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nub1P54729 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Gm7514-201ENSMUST00000209475 934 ntBASIC20.07■□□□□ 0.8
Nub1P54729 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nub1P54729 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nub1P54729 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nub1P54729 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Nub1P54729 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Nub1P54729 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nub1P54729 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Nub1P54729 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms