Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rfc1P35601 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc1P35601 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc1P35601 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.7■□□□□ 0.74
Rfc1P35601 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc1P35601 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc1P35601 Gm45102-201ENSMUST00000207427 857 ntBASIC19.7■□□□□ 0.74
Rfc1P35601 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc1P35601 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rfc1P35601 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.7■□□□□ 0.74
Rfc1P35601 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc1P35601 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.7■□□□□ 0.74
Rfc1P35601 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.69■□□□□ 0.74
Rfc1P35601 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.69■□□□□ 0.74
Rfc1P35601 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.69■□□□□ 0.74
Rfc1P35601 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Rfc1P35601 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc1P35601 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Rfc1P35601 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc1P35601 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc1P35601 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc1P35601 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rfc1P35601 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfc1P35601 Gm22238-201ENSMUST00000175222 88 ntBASIC19.68■□□□□ 0.74
Rfc1P35601 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.68■□□□□ 0.74
Rfc1P35601 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.68■□□□□ 0.74
Rfc1P35601 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc1P35601 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Gm14117-201ENSMUST00000122417 843 ntBASIC19.67■□□□□ 0.74
Rfc1P35601 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.67■□□□□ 0.74
Rfc1P35601 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfc1P35601 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rfc1P35601 Rps24-207ENSMUST00000224568 714 ntBASIC19.67■□□□□ 0.74
Rfc1P35601 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc1P35601 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.66■□□□□ 0.74
Rfc1P35601 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.66■□□□□ 0.74
Rfc1P35601 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.66■□□□□ 0.74
Rfc1P35601 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.66■□□□□ 0.74
Rfc1P35601 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rfc1P35601 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Rfc1P35601 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rfc1P35601 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc1P35601 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rfc1P35601 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc1P35601 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc1P35601 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.65■□□□□ 0.74
Rfc1P35601 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.65■□□□□ 0.74
Rfc1P35601 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.65■□□□□ 0.74
Rfc1P35601 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc1P35601 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc1P35601 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc1P35601 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc1P35601 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rfc1P35601 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfc1P35601 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.64■□□□□ 0.73
Rfc1P35601 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc1P35601 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms