Protein–RNA interactions for Protein: P31001

Des, Desmin, mousemouse

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DesP31001 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DesP31001 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DesP31001 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DesP31001 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DesP31001 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DesP31001 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.31■□□□□ 0.68
DesP31001 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DesP31001 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
DesP31001 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.3■□□□□ 0.68
DesP31001 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.3■□□□□ 0.68
DesP31001 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
DesP31001 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DesP31001 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DesP31001 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DesP31001 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DesP31001 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DesP31001 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DesP31001 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.29■□□□□ 0.68
DesP31001 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.29■□□□□ 0.68
DesP31001 Gm6139-201ENSMUST00000079261 882 ntBASIC19.29■□□□□ 0.68
DesP31001 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DesP31001 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DesP31001 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DesP31001 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.28■□□□□ 0.68
DesP31001 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DesP31001 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.28■□□□□ 0.68
DesP31001 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DesP31001 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DesP31001 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DesP31001 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DesP31001 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DesP31001 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DesP31001 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DesP31001 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DesP31001 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DesP31001 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DesP31001 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DesP31001 Gm26833-201ENSMUST00000180899 440 ntBASIC19.27■□□□□ 0.68
DesP31001 Gm27801-201ENSMUST00000184174 223 ntBASIC19.27■□□□□ 0.68
DesP31001 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
DesP31001 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
DesP31001 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DesP31001 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DesP31001 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DesP31001 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DesP31001 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.26■□□□□ 0.67
DesP31001 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DesP31001 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DesP31001 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
DesP31001 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.26■□□□□ 0.67
DesP31001 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.26■□□□□ 0.67
DesP31001 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DesP31001 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.26■□□□□ 0.67
DesP31001 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
DesP31001 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.26■□□□□ 0.67
DesP31001 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DesP31001 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
DesP31001 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DesP31001 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DesP31001 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms