Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nedd8P29595 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nedd8P29595 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nedd8P29595 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.37■□□□□ 0.37
Nedd8P29595 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.37■□□□□ 0.37
Nedd8P29595 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.37■□□□□ 0.37
Nedd8P29595 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.37■□□□□ 0.37
Nedd8P29595 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Nedd8P29595 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nedd8P29595 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.36■□□□□ 0.37
Nedd8P29595 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.36■□□□□ 0.37
Nedd8P29595 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nedd8P29595 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nedd8P29595 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nedd8P29595 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.35■□□□□ 0.37
Nedd8P29595 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nedd8P29595 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Nedd8P29595 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nedd8P29595 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.34■□□□□ 0.37
Nedd8P29595 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nedd8P29595 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd8P29595 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.33■□□□□ 0.37
Nedd8P29595 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd8P29595 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nedd8P29595 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd8P29595 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nedd8P29595 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nedd8P29595 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd8P29595 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nedd8P29595 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nedd8P29595 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd8P29595 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nedd8P29595 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd8P29595 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms