Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxd8P23463 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxd8P23463 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxd8P23463 Gm10698-201ENSMUST00000182663 604 ntBASIC19.5■□□□□ 0.71
Hoxd8P23463 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.5■□□□□ 0.71
Hoxd8P23463 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxd8P23463 Golph3-202ENSMUST00000226517 2359 ntBASIC19.5■□□□□ 0.71
Hoxd8P23463 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxd8P23463 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.5■□□□□ 0.71
Hoxd8P23463 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxd8P23463 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxd8P23463 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxd8P23463 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hoxd8P23463 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Hoxd8P23463 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxd8P23463 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxd8P23463 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxd8P23463 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxd8P23463 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.48■□□□□ 0.71
Hoxd8P23463 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.48■□□□□ 0.71
Hoxd8P23463 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hoxd8P23463 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hoxd8P23463 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxd8P23463 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxd8P23463 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxd8P23463 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxd8P23463 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.47■□□□□ 0.71
Hoxd8P23463 Gm13158-201ENSMUST00000122007 736 ntBASIC19.47■□□□□ 0.71
Hoxd8P23463 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxd8P23463 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxd8P23463 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxd8P23463 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxd8P23463 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.46■□□□□ 0.71
Hoxd8P23463 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.46■□□□□ 0.71
Hoxd8P23463 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.46■□□□□ 0.71
Hoxd8P23463 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hoxd8P23463 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Flg-201ENSMUST00000050758 1488 ntBASIC19.46■□□□□ 0.71
Hoxd8P23463 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxd8P23463 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.45■□□□□ 0.7
Hoxd8P23463 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxd8P23463 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxd8P23463 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Hoxd8P23463 Gm11927-201ENSMUST00000118472 759 ntBASIC19.44■□□□□ 0.7
Hoxd8P23463 Gm15378-201ENSMUST00000121894 207 ntBASIC19.44■□□□□ 0.7
Hoxd8P23463 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 Gm6576-201ENSMUST00000169678 883 ntBASIC19.44■□□□□ 0.7
Hoxd8P23463 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxd8P23463 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Hoxd8P23463 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxd8P23463 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Hoxd8P23463 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.43■□□□□ 0.7
Hoxd8P23463 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxd8P23463 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxd8P23463 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxd8P23463 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxd8P23463 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxd8P23463 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Hoxd8P23463 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms