Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd44P15379 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.73■□□□□ 0.75
Cd44P15379 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd44P15379 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd44P15379 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cd44P15379 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.71■□□□□ 0.75
Cd44P15379 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.71■□□□□ 0.75
Cd44P15379 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.71■□□□□ 0.75
Cd44P15379 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Gm43173-201ENSMUST00000202246 593 ntBASIC19.71■□□□□ 0.75
Cd44P15379 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.71■□□□□ 0.75
Cd44P15379 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd44P15379 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cd44P15379 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Mir7075-201ENSMUST00000184187 82 ntBASIC19.7■□□□□ 0.74
Cd44P15379 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.7■□□□□ 0.74
Cd44P15379 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cd44P15379 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd44P15379 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cd44P15379 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cd44P15379 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Cd44P15379 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cd44P15379 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cd44P15379 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.69■□□□□ 0.74
Cd44P15379 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd44P15379 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.68■□□□□ 0.74
Cd44P15379 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 Gm11421-201ENSMUST00000122124 294 ntBASIC19.68■□□□□ 0.74
Cd44P15379 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.68■□□□□ 0.74
Cd44P15379 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.68■□□□□ 0.74
Cd44P15379 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd44P15379 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cd44P15379 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cd44P15379 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd44P15379 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cd44P15379 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cd44P15379 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd44P15379 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd44P15379 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cd44P15379 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.66■□□□□ 0.74
Cd44P15379 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cd44P15379 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd44P15379 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd44P15379 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Cd44P15379 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd44P15379 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd44P15379 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd44P15379 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.65■□□□□ 0.74
Cd44P15379 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.65■□□□□ 0.74
Cd44P15379 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cd44P15379 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd44P15379 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cd44P15379 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd44P15379 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd44P15379 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cd44P15379 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cd44P15379 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd44P15379 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd44P15379 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms