Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cntn1P12960 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cntn1P12960 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.96■□□□□ 0.47
Cntn1P12960 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntn1P12960 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cntn1P12960 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.96■□□□□ 0.47
Cntn1P12960 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Cntn1P12960 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cntn1P12960 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntn1P12960 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cntn1P12960 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Cntn1P12960 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.95■□□□□ 0.46
Cntn1P12960 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.95■□□□□ 0.46
Cntn1P12960 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cntn1P12960 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cntn1P12960 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.94■□□□□ 0.46
Cntn1P12960 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.94■□□□□ 0.46
Cntn1P12960 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cntn1P12960 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cntn1P12960 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cntn1P12960 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cntn1P12960 Gm27011-201ENSMUST00000182352 972 ntBASIC17.93■□□□□ 0.46
Cntn1P12960 Gm5408-201ENSMUST00000197998 747 ntBASIC17.93■□□□□ 0.46
Cntn1P12960 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Cntn1P12960 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.93■□□□□ 0.46
Cntn1P12960 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cntn1P12960 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cntn1P12960 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Cntn1P12960 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.92■□□□□ 0.46
Cntn1P12960 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.92■□□□□ 0.46
Cntn1P12960 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cntn1P12960 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Gm4968-201ENSMUST00000071458 858 ntBASIC17.92■□□□□ 0.46
Cntn1P12960 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cntn1P12960 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cntn1P12960 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cntn1P12960 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cntn1P12960 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.91■□□□□ 0.46
Cntn1P12960 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Cntn1P12960 Gm12441-201ENSMUST00000121806 588 ntBASIC17.91■□□□□ 0.46
Cntn1P12960 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.91■□□□□ 0.46
Cntn1P12960 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.91■□□□□ 0.46
Cntn1P12960 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cntn1P12960 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cntn1P12960 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Cntn1P12960 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.9■□□□□ 0.46
Cntn1P12960 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.9■□□□□ 0.46
Cntn1P12960 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.9■□□□□ 0.46
Cntn1P12960 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cntn1P12960 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cntn1P12960 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cntn1P12960 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cntn1P12960 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms