Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa9P09631 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa9P09631 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hoxa9P09631 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa9P09631 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa9P09631 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa9P09631 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hoxa9P09631 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa9P09631 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.87■□□□□ 0.61
Hoxa9P09631 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa9P09631 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa9P09631 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.87■□□□□ 0.61
Hoxa9P09631 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa9P09631 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa9P09631 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hoxa9P09631 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hoxa9P09631 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.86■□□□□ 0.61
Hoxa9P09631 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxa9P09631 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa9P09631 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa9P09631 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.85■□□□□ 0.61
Hoxa9P09631 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa9P09631 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa9P09631 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa9P09631 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.85■□□□□ 0.61
Hoxa9P09631 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxa9P09631 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxa9P09631 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Hoxa9P09631 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.84■□□□□ 0.61
Hoxa9P09631 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hoxa9P09631 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa9P09631 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxa9P09631 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxa9P09631 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxa9P09631 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.83■□□□□ 0.61
Hoxa9P09631 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hoxa9P09631 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxa9P09631 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxa9P09631 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa9P09631 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Hoxa9P09631 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hoxa9P09631 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.83■□□□□ 0.6
Hoxa9P09631 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa9P09631 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.82■□□□□ 0.6
Hoxa9P09631 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hoxa9P09631 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hoxa9P09631 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Hoxa9P09631 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.82■□□□□ 0.6
Hoxa9P09631 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa9P09631 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hoxa9P09631 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hoxa9P09631 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Gm12896-201ENSMUST00000118430 226 ntBASIC18.81■□□□□ 0.6
Hoxa9P09631 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.81■□□□□ 0.6
Hoxa9P09631 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.81■□□□□ 0.6
Hoxa9P09631 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.81■□□□□ 0.6
Hoxa9P09631 Gm2559-201ENSMUST00000201323 363 ntBASIC18.81■□□□□ 0.6
Hoxa9P09631 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Hoxa9P09631 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa9P09631 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms