Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.71■□□□□ 0.43
ApoeP08226 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.71■□□□□ 0.43
ApoeP08226 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.71■□□□□ 0.43
ApoeP08226 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.71■□□□□ 0.43
ApoeP08226 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ApoeP08226 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.7■□□□□ 0.42
ApoeP08226 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.7■□□□□ 0.42
ApoeP08226 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ApoeP08226 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ApoeP08226 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ApoeP08226 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ApoeP08226 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ApoeP08226 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ApoeP08226 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ApoeP08226 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ApoeP08226 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.69■□□□□ 0.42
ApoeP08226 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ApoeP08226 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ApoeP08226 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ApoeP08226 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.68■□□□□ 0.42
ApoeP08226 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ApoeP08226 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ApoeP08226 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.67■□□□□ 0.42
ApoeP08226 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.67■□□□□ 0.42
ApoeP08226 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ApoeP08226 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ApoeP08226 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ApoeP08226 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ApoeP08226 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.66■□□□□ 0.42
ApoeP08226 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ApoeP08226 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ApoeP08226 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.66■□□□□ 0.42
ApoeP08226 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.66■□□□□ 0.42
ApoeP08226 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ApoeP08226 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ApoeP08226 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ApoeP08226 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ApoeP08226 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ApoeP08226 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ApoeP08226 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.65■□□□□ 0.42
ApoeP08226 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.65■□□□□ 0.42
ApoeP08226 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ApoeP08226 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.65■□□□□ 0.42
ApoeP08226 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ApoeP08226 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ApoeP08226 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ApoeP08226 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ApoeP08226 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.64■□□□□ 0.42
ApoeP08226 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
ApoeP08226 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms