Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tp53P02340 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tp53P02340 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tp53P02340 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tp53P02340 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.32■□□□□ 0.84
Tp53P02340 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tp53P02340 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tp53P02340 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tp53P02340 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tp53P02340 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tp53P02340 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Tp53P02340 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Gm10849-201ENSMUST00000100397 618 ntBASIC20.31■□□□□ 0.84
Tp53P02340 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tp53P02340 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.31■□□□□ 0.84
Tp53P02340 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tp53P02340 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.3■□□□□ 0.84
Tp53P02340 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.3■□□□□ 0.84
Tp53P02340 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.3■□□□□ 0.84
Tp53P02340 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tp53P02340 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tp53P02340 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tp53P02340 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.29■□□□□ 0.84
Tp53P02340 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tp53P02340 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tp53P02340 Gm7291-201ENSMUST00000199147 382 ntBASIC20.29■□□□□ 0.84
Tp53P02340 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tp53P02340 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.29■□□□□ 0.84
Tp53P02340 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tp53P02340 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tp53P02340 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.28■□□□□ 0.84
Tp53P02340 Gm42778-201ENSMUST00000199644 553 ntBASIC20.28■□□□□ 0.84
Tp53P02340 Gm42642-201ENSMUST00000200683 355 ntBASIC20.28■□□□□ 0.84
Tp53P02340 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.28■□□□□ 0.84
Tp53P02340 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tp53P02340 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tp53P02340 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tp53P02340 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.27■□□□□ 0.84
Tp53P02340 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tp53P02340 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tp53P02340 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tp53P02340 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tp53P02340 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Tp53P02340 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tp53P02340 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tp53P02340 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.26■□□□□ 0.83
Tp53P02340 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tp53P02340 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.25■□□□□ 0.83
Tp53P02340 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tp53P02340 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tp53P02340 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms