Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.44■□□□□ 0.7
P01878 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
P01878 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
P01878 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01878 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
P01878 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.43■□□□□ 0.7
P01878 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.43■□□□□ 0.7
P01878 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P01878 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
P01878 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.42■□□□□ 0.7
P01878 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.42■□□□□ 0.7
P01878 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01878 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
P01878 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
P01878 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.41■□□□□ 0.7
P01878 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.41■□□□□ 0.7
P01878 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.41■□□□□ 0.7
P01878 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01878 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
P01878 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
P01878 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Gm6576-201ENSMUST00000169678 883 ntBASIC19.4■□□□□ 0.7
P01878 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.4■□□□□ 0.7
P01878 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.4■□□□□ 0.7
P01878 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.4■□□□□ 0.7
P01878 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01878 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
P01878 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
P01878 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.39■□□□□ 0.69
P01878 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.39■□□□□ 0.69
P01878 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.39■□□□□ 0.69
P01878 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.39■□□□□ 0.69
P01878 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.39■□□□□ 0.69
P01878 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01878 Golph3-202ENSMUST00000226517 2359 ntBASIC19.39■□□□□ 0.69
P01878 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01878 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
P01878 Gm715-201ENSMUST00000117865 831 ntBASIC19.38■□□□□ 0.69
P01878 Gm13158-201ENSMUST00000122007 736 ntBASIC19.38■□□□□ 0.69
P01878 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
P01878 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.38■□□□□ 0.69
P01878 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.38■□□□□ 0.69
P01878 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.38■□□□□ 0.69
P01878 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01878 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01878 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01878 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01878 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01878 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.38■□□□□ 0.69
P01878 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms