Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Hcn3O88705 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn3O88705 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hcn3O88705 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Hcn3O88705 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Hcn3O88705 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.93■□□□□ 0.46
Hcn3O88705 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.93■□□□□ 0.46
Hcn3O88705 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn3O88705 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hcn3O88705 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Hcn3O88705 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hcn3O88705 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn3O88705 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.91■□□□□ 0.46
Hcn3O88705 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.91■□□□□ 0.46
Hcn3O88705 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hcn3O88705 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
Hcn3O88705 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.91■□□□□ 0.46
Hcn3O88705 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn3O88705 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Hcn3O88705 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn3O88705 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn3O88705 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.9■□□□□ 0.46
Hcn3O88705 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.9■□□□□ 0.46
Hcn3O88705 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn3O88705 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Hcn3O88705 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn3O88705 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.9■□□□□ 0.46
Hcn3O88705 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.9■□□□□ 0.46
Hcn3O88705 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Hcn3O88705 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn3O88705 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn3O88705 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.89■□□□□ 0.46
Hcn3O88705 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hcn3O88705 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn3O88705 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn3O88705 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.89■□□□□ 0.45
Hcn3O88705 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.89■□□□□ 0.45
Hcn3O88705 Gm13241-201ENSMUST00000094493 780 ntBASIC17.89■□□□□ 0.45
Hcn3O88705 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn3O88705 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.89■□□□□ 0.45
Hcn3O88705 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.89■□□□□ 0.45
Hcn3O88705 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn3O88705 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Hcn3O88705 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.88■□□□□ 0.45
Hcn3O88705 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.88■□□□□ 0.45
Hcn3O88705 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn3O88705 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Hcn3O88705 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.87■□□□□ 0.45
Hcn3O88705 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.87■□□□□ 0.45
Hcn3O88705 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hcn3O88705 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms