Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.01■□□□□ 0.15
Cldn1O88551 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cldn1O88551 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cldn1O88551 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cldn1O88551 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.01■□□□□ 0.15
Cldn1O88551 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cldn1O88551 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Cldn1O88551 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cldn1O88551 Gm15565-201ENSMUST00000118890 427 ntBASIC16■□□□□ 0.15
Cldn1O88551 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16■□□□□ 0.15
Cldn1O88551 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cldn1O88551 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cldn1O88551 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cldn1O88551 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.99■□□□□ 0.15
Cldn1O88551 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Cldn1O88551 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cldn1O88551 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldn1O88551 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Cldn1O88551 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cldn1O88551 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.98■□□□□ 0.15
Cldn1O88551 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.98■□□□□ 0.15
Cldn1O88551 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldn1O88551 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldn1O88551 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cldn1O88551 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cldn1O88551 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cldn1O88551 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.97■□□□□ 0.15
Cldn1O88551 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.97■□□□□ 0.15
Cldn1O88551 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.97■□□□□ 0.15
Cldn1O88551 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Cldn1O88551 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldn1O88551 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.96■□□□□ 0.15
Cldn1O88551 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.96■□□□□ 0.15
Cldn1O88551 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.96■□□□□ 0.15
Cldn1O88551 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cldn1O88551 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cldn1O88551 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cldn1O88551 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cldn1O88551 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cldn1O88551 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Cldn1O88551 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms