Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.76■□□□□ 0.59
Dnmt3aO88508 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3aO88508 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3aO88508 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Dnmt3aO88508 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnmt3aO88508 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnmt3aO88508 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dnmt3aO88508 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Dnmt3aO88508 Gm27405-201ENSMUST00000184201 112 ntBASIC18.74■□□□□ 0.59
Dnmt3aO88508 Gm7514-201ENSMUST00000209475 934 ntBASIC18.74■□□□□ 0.59
Dnmt3aO88508 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dnmt3aO88508 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.73■□□□□ 0.59
Dnmt3aO88508 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.73■□□□□ 0.59
Dnmt3aO88508 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.73■□□□□ 0.59
Dnmt3aO88508 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.73■□□□□ 0.59
Dnmt3aO88508 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dnmt3aO88508 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Gm13534-201ENSMUST00000121169 513 ntBASIC18.72■□□□□ 0.59
Dnmt3aO88508 Gm7291-201ENSMUST00000199147 382 ntBASIC18.72■□□□□ 0.59
Dnmt3aO88508 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnmt3aO88508 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Dnmt3aO88508 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.71■□□□□ 0.59
Dnmt3aO88508 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.71■□□□□ 0.59
Dnmt3aO88508 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Dnmt3aO88508 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Dnmt3aO88508 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.69■□□□□ 0.58
Dnmt3aO88508 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Dnmt3aO88508 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms