Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cdh16O88338 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh16O88338 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh16O88338 Rps24-207ENSMUST00000224568 714 ntBASIC18.34■□□□□ 0.53
Cdh16O88338 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdh16O88338 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh16O88338 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh16O88338 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh16O88338 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh16O88338 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh16O88338 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh16O88338 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh16O88338 Gm14117-201ENSMUST00000122417 843 ntBASIC18.33■□□□□ 0.52
Cdh16O88338 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.33■□□□□ 0.52
Cdh16O88338 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdh16O88338 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh16O88338 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cdh16O88338 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh16O88338 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdh16O88338 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cdh16O88338 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh16O88338 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Cdh16O88338 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cdh16O88338 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh16O88338 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.31■□□□□ 0.52
Cdh16O88338 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdh16O88338 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdh16O88338 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdh16O88338 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.3■□□□□ 0.52
Cdh16O88338 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh16O88338 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cdh16O88338 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdh16O88338 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cdh16O88338 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
Cdh16O88338 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdh16O88338 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.29■□□□□ 0.52
Cdh16O88338 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.29■□□□□ 0.52
Cdh16O88338 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh16O88338 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cdh16O88338 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Cdh16O88338 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh16O88338 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdh16O88338 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh16O88338 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Cdh16O88338 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh16O88338 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.27■□□□□ 0.52
Cdh16O88338 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms