Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top3aO70157 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Top3aO70157 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top3aO70157 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
Top3aO70157 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.8■□□□□ 0.6
Top3aO70157 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Top3aO70157 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top3aO70157 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Top3aO70157 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.79■□□□□ 0.6
Top3aO70157 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.79■□□□□ 0.6
Top3aO70157 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Top3aO70157 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.79■□□□□ 0.6
Top3aO70157 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Top3aO70157 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top3aO70157 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Top3aO70157 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Top3aO70157 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Top3aO70157 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top3aO70157 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Top3aO70157 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.77■□□□□ 0.6
Top3aO70157 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Top3aO70157 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Top3aO70157 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.77■□□□□ 0.6
Top3aO70157 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.77■□□□□ 0.6
Top3aO70157 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.77■□□□□ 0.6
Top3aO70157 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.77■□□□□ 0.6
Top3aO70157 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Top3aO70157 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.77■□□□□ 0.6
Top3aO70157 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.77■□□□□ 0.6
Top3aO70157 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Top3aO70157 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Top3aO70157 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Top3aO70157 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Top3aO70157 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Top3aO70157 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Gm7860-201ENSMUST00000121190 879 ntBASIC18.76■□□□□ 0.59
Top3aO70157 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.76■□□□□ 0.59
Top3aO70157 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Top3aO70157 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.76■□□□□ 0.59
Top3aO70157 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Top3aO70157 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top3aO70157 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Top3aO70157 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top3aO70157 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Top3aO70157 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top3aO70157 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Top3aO70157 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top3aO70157 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top3aO70157 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Top3aO70157 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Top3aO70157 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Top3aO70157 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top3aO70157 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms