Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pja1O55176 Gm21956-201ENSMUST00000179946 522 ntBASIC19.81■□□□□ 0.76
Pja1O55176 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.81■□□□□ 0.76
Pja1O55176 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pja1O55176 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pja1O55176 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Pja1O55176 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pja1O55176 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.8■□□□□ 0.76
Pja1O55176 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pja1O55176 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pja1O55176 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.79■□□□□ 0.76
Pja1O55176 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.79■□□□□ 0.76
Pja1O55176 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pja1O55176 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pja1O55176 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pja1O55176 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Pja1O55176 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pja1O55176 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pja1O55176 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pja1O55176 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pja1O55176 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pja1O55176 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pja1O55176 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pja1O55176 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Pja1O55176 Gm11421-201ENSMUST00000122124 294 ntBASIC19.77■□□□□ 0.76
Pja1O55176 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pja1O55176 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.77■□□□□ 0.76
Pja1O55176 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pja1O55176 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pja1O55176 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pja1O55176 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.76■□□□□ 0.75
Pja1O55176 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pja1O55176 Gm43173-201ENSMUST00000202246 593 ntBASIC19.76■□□□□ 0.75
Pja1O55176 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Pja1O55176 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pja1O55176 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Pja1O55176 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.75■□□□□ 0.75
Pja1O55176 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pja1O55176 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Gm27801-201ENSMUST00000184174 223 ntBASIC19.75■□□□□ 0.75
Pja1O55176 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.75■□□□□ 0.75
Pja1O55176 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pja1O55176 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pja1O55176 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pja1O55176 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pja1O55176 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pja1O55176 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.74■□□□□ 0.75
Pja1O55176 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.74■□□□□ 0.75
Pja1O55176 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pja1O55176 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pja1O55176 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pja1O55176 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pja1O55176 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms