Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sdc4O35988 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sdc4O35988 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sdc4O35988 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc4O35988 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.31■□□□□ 0.68
Sdc4O35988 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sdc4O35988 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.31■□□□□ 0.68
Sdc4O35988 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.31■□□□□ 0.68
Sdc4O35988 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.31■□□□□ 0.68
Sdc4O35988 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sdc4O35988 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc4O35988 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.3■□□□□ 0.68
Sdc4O35988 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sdc4O35988 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Gm26524-201ENSMUST00000192339 390 ntBASIC19.3■□□□□ 0.68
Sdc4O35988 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.3■□□□□ 0.68
Sdc4O35988 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.3■□□□□ 0.68
Sdc4O35988 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sdc4O35988 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.3■□□□□ 0.68
Sdc4O35988 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc4O35988 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc4O35988 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sdc4O35988 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc4O35988 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc4O35988 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc4O35988 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc4O35988 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.29■□□□□ 0.68
Sdc4O35988 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.29■□□□□ 0.68
Sdc4O35988 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.29■□□□□ 0.68
Sdc4O35988 Rab3c-203ENSMUST00000224180 967 ntBASIC19.29■□□□□ 0.68
Sdc4O35988 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc4O35988 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sdc4O35988 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.29■□□□□ 0.68
Sdc4O35988 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Sdc4O35988 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Sdc4O35988 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Sdc4O35988 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc4O35988 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc4O35988 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.27■□□□□ 0.68
Sdc4O35988 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc4O35988 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.27■□□□□ 0.68
Sdc4O35988 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc4O35988 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc4O35988 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Sdc4O35988 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc4O35988 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sdc4O35988 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sdc4O35988 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Sdc4O35988 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.26■□□□□ 0.67
Sdc4O35988 Gm10653-202ENSMUST00000139570 835 ntBASIC19.26■□□□□ 0.67
Sdc4O35988 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.26■□□□□ 0.67
Sdc4O35988 Gm20760-201ENSMUST00000179197 648 ntBASIC19.26■□□□□ 0.67
Sdc4O35988 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.26■□□□□ 0.67
Sdc4O35988 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc4O35988 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Sdc4O35988 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc4O35988 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc4O35988 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc4O35988 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc4O35988 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc4O35988 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sdc4O35988 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc4O35988 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc4O35988 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms